fastglmmLib::ModelFitGLMM Class Reference

#include <ModelFit.h>

Inheritance diagram for fastglmmLib::ModelFitGLMM:

Public Member Functions
	ModelFitGLMM ()
	ModelFitGLMM (ModelFitLMM &gmf, const string &family, const int &iter)
Public Member Functions inherited from fastglmmLib::ModelFitLMM
	ModelFitLMM ()
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov, const vec &residuals)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov, const vec &residuals, const vec &hatvalues)
void	setUS (const mat &U_, const vec &s_, const mat &V_)
void	setUS (const sp_mat &U_, const vec &s_, const mat &V_)
void	setUS (const mat &U_, const vec &s_, const sp_mat &V_)
void	setUS (const sp_mat &U_, const vec &s_, const sp_mat &V_)
void	set_w_mean (const double &value)
Public Member Functions inherited from fastglmmLib::ModelFit
	ModelFit ()
	ModelFit (const bool &success, const vec &coef)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf)
	ModelFit (const bool &success, const double &coef, const double &se, const double &dispersion, const double &rdf)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov, const vec &residuals)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov, const vec &residuals, const vec &hatvalues)
void	setDevResids (const vec &dr, const vec &y, const vec &mu, const vec w={})
void	setFittedValues (const vec &mu_in, const vec w={})

Public Attributes
string	family = ""
double	theta = datum::nan
double	mu_mean = datum::nan
double	y_mean = datum::nan
double	nZeroPrediction = 0
Public Attributes inherited from fastglmmLib::ModelFitLMM
double	logLik
vec	weights
vec	ru
vec	y
double	delta
double	sigSq_g
double	sigSq_e
int	iter
double	w_mean
bool	isSet_U = false
bool	isSet_Usp = false
bool	isSet_V = false
bool	isSet_Vsp = false
mat	U
mat	V
sp_mat	Usp
sp_mat	Vsp
vec	s
mat	A_sat
mat	B_sat
mat	hessian_vc
Public Attributes inherited from fastglmmLib::ModelFit
bool	success
vec	coef
vec	se
double	dispersion = datum::nan
double	rdf = datum::nan
string	ID
mat	vcov
vec	residuals
vec	hatvalues
vec	mu
vec	devianceResiduals
double	varFitted = datum::nan

Constructor & Destructor Documentation

ModelFitGLMM() [1/2]

fastglmmLib::ModelFitGLMM::ModelFitGLMM ( )

inline

ModelFitGLMM() [2/2]

fastglmmLib::ModelFitGLMM::ModelFitGLMM ( ModelFitLMM & gmf, const string & family, const int & iter )

inline

Member Data Documentation

family

string fastglmmLib::ModelFitGLMM::family = ""

mu_mean

double fastglmmLib::ModelFitGLMM::mu_mean = datum::nan

nZeroPrediction

double fastglmmLib::ModelFitGLMM::nZeroPrediction = 0

theta

double fastglmmLib::ModelFitGLMM::theta = datum::nan

y_mean

double fastglmmLib::ModelFitGLMM::y_mean = datum::nan

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The documentation for this class was generated from the following file:

• inst/include/ModelFit.h