fastglmmLib::ModelFitLMM Class Reference

#include <ModelFit.h>

Inheritance diagram for fastglmmLib::ModelFitLMM:

Public Member Functions
	ModelFitLMM ()
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov, const vec &residuals)
	ModelFitLMM (const bool &success, const double &logLik, const vec &weights, const vec &ru, const vec &y, const double &delta, const double &sigSq_g, const double &sigSq_e, const int &iter, const double &w_mean, const vec &coef, const vec &se, const double &rdf, const mat &vcov, const vec &residuals, const vec &hatvalues)
void	setUS (const mat &U_, const vec &s_, const mat &V_)
void	setUS (const sp_mat &U_, const vec &s_, const mat &V_)
void	setUS (const mat &U_, const vec &s_, const sp_mat &V_)
void	setUS (const sp_mat &U_, const vec &s_, const sp_mat &V_)
void	set_w_mean (const double &value)
Public Member Functions inherited from fastglmmLib::ModelFit
	ModelFit ()
	ModelFit (const bool &success, const vec &coef)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf)
	ModelFit (const bool &success, const double &coef, const double &se, const double &dispersion, const double &rdf)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov, const vec &residuals)
	ModelFit (const bool &success, const vec &coef, const vec &se, const double &dispersion, const double &rdf, const mat &vcov, const vec &residuals, const vec &hatvalues)
void	setDevResids (const vec &dr, const vec &y, const vec &mu, const vec w={})
void	setFittedValues (const vec &mu_in, const vec w={})

Public Attributes
double	logLik
vec	weights
vec	ru
vec	y
double	delta
double	sigSq_g
double	sigSq_e
int	iter
double	w_mean
bool	isSet_U = false
bool	isSet_Usp = false
bool	isSet_V = false
bool	isSet_Vsp = false
mat	U
mat	V
sp_mat	Usp
sp_mat	Vsp
vec	s
mat	A_sat
mat	B_sat
mat	hessian_vc
Public Attributes inherited from fastglmmLib::ModelFit
bool	success
vec	coef
vec	se
double	dispersion = datum::nan
double	rdf = datum::nan
string	ID
mat	vcov
vec	residuals
vec	hatvalues
vec	mu
vec	devianceResiduals
double	varFitted = datum::nan

Constructor & Destructor Documentation

ModelFitLMM() [1/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( )

inline

ModelFitLMM() [2/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( const bool & success, const double & logLik, const vec & weights, const vec & ru, const vec & y, const double & delta, const double & sigSq_g, const double & sigSq_e, const int & iter, const double & w_mean, const vec & coef )

inline

ModelFitLMM() [3/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( const bool & success, const double & logLik, const vec & weights, const vec & ru, const vec & y, const double & delta, const double & sigSq_g, const double & sigSq_e, const int & iter, const double & w_mean, const vec & coef, const vec & se, const double & rdf )

inline

ModelFitLMM() [4/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( const bool & success, const double & logLik, const vec & weights, const vec & ru, const vec & y, const double & delta, const double & sigSq_g, const double & sigSq_e, const int & iter, const double & w_mean, const vec & coef, const vec & se, const double & rdf, const mat & vcov )

inline

ModelFitLMM() [5/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( const bool & success, const double & logLik, const vec & weights, const vec & ru, const vec & y, const double & delta, const double & sigSq_g, const double & sigSq_e, const int & iter, const double & w_mean, const vec & coef, const vec & se, const double & rdf, const mat & vcov, const vec & residuals )

inline

ModelFitLMM() [6/6]

fastglmmLib::ModelFitLMM::ModelFitLMM ( const bool & success, const double & logLik, const vec & weights, const vec & ru, const vec & y, const double & delta, const double & sigSq_g, const double & sigSq_e, const int & iter, const double & w_mean, const vec & coef, const vec & se, const double & rdf, const mat & vcov, const vec & residuals, const vec & hatvalues )

inline

Member Function Documentation

set_w_mean()

void fastglmmLib::ModelFitLMM::set_w_mean ( const double & value )

inline

setUS() [1/4]

void fastglmmLib::ModelFitLMM::setUS ( const mat & U_, const vec & s_, const mat & V_ )

inline

setUS() [2/4]

void fastglmmLib::ModelFitLMM::setUS ( const mat & U_, const vec & s_, const sp_mat & V_ )

inline

setUS() [3/4]

void fastglmmLib::ModelFitLMM::setUS ( const sp_mat & U_, const vec & s_, const mat & V_ )

inline

setUS() [4/4]

void fastglmmLib::ModelFitLMM::setUS ( const sp_mat & U_, const vec & s_, const sp_mat & V_ )

inline

Member Data Documentation

A_sat

mat fastglmmLib::ModelFitLMM::A_sat

B_sat

mat fastglmmLib::ModelFitLMM::B_sat

delta

double fastglmmLib::ModelFitLMM::delta

hessian_vc

mat fastglmmLib::ModelFitLMM::hessian_vc

isSet_U

bool fastglmmLib::ModelFitLMM::isSet_U = false

isSet_Usp

bool fastglmmLib::ModelFitLMM::isSet_Usp = false

isSet_V

bool fastglmmLib::ModelFitLMM::isSet_V = false

isSet_Vsp

bool fastglmmLib::ModelFitLMM::isSet_Vsp = false

iter

int fastglmmLib::ModelFitLMM::iter

logLik

double fastglmmLib::ModelFitLMM::logLik

ru

vec fastglmmLib::ModelFitLMM::ru

s

vec fastglmmLib::ModelFitLMM::s

sigSq_e

double fastglmmLib::ModelFitLMM::sigSq_e

sigSq_g

double fastglmmLib::ModelFitLMM::sigSq_g

U

mat fastglmmLib::ModelFitLMM::U

Usp

sp_mat fastglmmLib::ModelFitLMM::Usp

V

mat fastglmmLib::ModelFitLMM::V

Vsp

sp_mat fastglmmLib::ModelFitLMM::Vsp

w_mean

double fastglmmLib::ModelFitLMM::w_mean

weights

vec fastglmmLib::ModelFitLMM::weights

y

vec fastglmmLib::ModelFitLMM::y

---

The documentation for this class was generated from the following file:

• inst/include/ModelFit.h