Function reference • zenith

All functions

corInGeneSet(): Evaluate mean correlation between residuals in gene set

.rankSumTestWithCorrelation(): Two Sample Wilcoxon-Mann-Whitney Rank Sum Test Allowing For Correlation

get_GeneOntology(): Load Gene Ontology genesets

get_MSigDB(): Load MSigDB genesets

plotZenithResults(): Heatmap of zenith results using ggplot2

zenith(): Gene set analysis following differential expression with dream

zenithPR_gsa(): Gene set analysis using pre-computed test statistic

zenith_gsa(): Perform gene set analysis using zenith