R/recodeGeneSet.R
plot_mds.Rd
Plot gene sets in two dimensions based on Jaccard distance
plot_mds(gsc, res, value = "-log10(p.shift)", zlim = c(0, NA))
GeneSetCollection object
data.frame with score for each gene set
indicate which columns of res to use to color points
limits of colors. c(0,NA) indicates a range from 0 to the largest observed value